Sample Set Annotation Tool: Full-term placenta, smokers and non-smokers

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

Gene expression in placenta from 5 smoking and 5 non-smoking mothers analyzed by Affymetrix Hg133_plus2 microarrays.Keywords: Toxic response

Hypothesis

Experimental Design

Gene expression in placenta from 5 smoking and 5 non-smoking mothers analyzed by Affymetrix Hg133_plus2 microarrays.

Experimental Variables

Controls

Methods

Additional Information

Expected Samples:

10 Samples Loaded: 10

Species

Human (Homo sapiens)

Sample Source

placenta

Disease

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	!Sample_title	!Sample Title	Group
GSM180067	JR-26 placenta, non-smoking, XY	JR-26 placenta, non-smoking, XY	non-smoking
GSM180078	JR-14 placenta, smoking, XY	JR-14 placenta, smoking, XY	smoking
GSM180432	JR-27 placenta, non-smoking, XX	JR-27 placenta, non-smoking, XX	non-smoking
GSM180439	JR-31 placenta, non-smoking, XY	JR-31 placenta, non-smoking, XY	non-smoking
GSM180443	JR-915 placenta, non-smoking, XY	JR-915 placenta, non-smoking, XY	non-smoking

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File
sampleset4000022_sampleannotations_group.csv Sample Set Spreadsheet

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID	!Sample Title	!Sample Title	Group
GSM180067	JR-26 placenta, non-smoking, XY	JR-26 placenta, non-smoking, XY	non-smoking
GSM180078	JR-14 placenta, smoking, XY	JR-14 placenta, smoking, XY	smoking
GSM180432	JR-27 placenta, non-smoking, XX	JR-27 placenta, non-smoking, XX	non-smoking
GSM180439	JR-31 placenta, non-smoking, XY	JR-31 placenta, non-smoking, XY	non-smoking
GSM180443	JR-915 placenta, non-smoking, XY	JR-915 placenta, non-smoking, XY	non-smoking
GSM180445	JR-916 placenta, smoking, XY	JR-916 placenta, smoking, XY	smoking
GSM180446	JR-917 placenta, non-smoking, XX	JR-917 placenta, non-smoking, XX	non-smoking
GSM180447	JR-12 placenta, smoking, XY	JR-12 placenta, smoking, XY	smoking
GSM180448	JR-13 placenta, smoking, XY	JR-13 placenta, smoking, XY	smoking
GSM180449	JR-918 placenta, smoking, XY	JR-918 placenta, smoking, XY	smoking

Group Sets View in Gene Expression Browser

Name
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Module Analysis

Group Set
All Samples

SIDRA