Sample Set Annotation Tool: Chorionic villus sampling (CVS) microarray in preeclampsia

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

4 chorionic villus sampling specimens in pregnancies destined for preeclampsia and 8 matched controls were analyzed36 genes were differentially expressed using J5 score and prediction modeling in caGEDA computer program

Hypothesis

Experimental Design

case-control comparisons

Experimental Variables

Controls

Methods

Additional Information

Expected Samples:

12 Samples Loaded: 12

Species

Human (Homo sapiens)

Sample Source

chorionic villi-placenta

Disease

Pre-eclampsia

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	!Sample Title	Group	Caucasian, normal karyotypes
GSM320282	Control 1	control	TRUE
GSM320283	Case 1	preeclampsia	TRUE
GSM320284	Case 2	preeclampsia	TRUE
GSM320285	Control 2	control	TRUE
GSM320286	Control 3	control	TRUE

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File
sampleset4000021_sampleannotations_group.csv Sample Set Spreadsheet
sampleset4000021_sampleannotations_group.csv Sample Set Spreadsheet

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID	!Sample Title	Group	Caucasian, normal karyotypes
GSM320282	Control 1	control	TRUE
GSM320283	Case 1	preeclampsia	TRUE
GSM320284	Case 2	preeclampsia	TRUE
GSM320285	Control 2	control	TRUE
GSM320286	Control 3	control	TRUE
GSM320287	Control 4	control	TRUE
GSM320288	Case 3	preeclampsia	TRUE
GSM320289	Control 5	control	TRUE
GSM320290	Control 6	control	TRUE
GSM320291	Control 7	control	TRUE
GSM320292	Case 4	preeclampsia	TRUE
GSM320293	Control 8	control	TRUE

Group Sets View in Gene Expression Browser

Name
All Samples	Default	View
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Module Analysis

Group Set
All Samples

SIDRA