Sample Set Annotation Tool: Placental gene expression in severe preeclampsia

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

The series is composed of thirty hybridizations for analysis of differentially expressed genes in normal placenta tissues from patients with normal labor and placenta tissues from patients with severe preeclampsia. Patients tissues samples were obtained from (Vasilis. Total RNA extraction was performed by using the MagNa Pure Compact RNA Isolation Kit (Roche Applied Science).

Hypothesis

Experimental Design

Twenty-six out of 50 normal placentas were randomly selected to match with 17 preeclamptic placentas, accounting for parity. Microarrays were performed applying a direct comparison design.

Experimental Variables

Controls

Methods

Additional Information

Expected Samples:

43 Samples Loaded: 43

Species

Human (Homo sapiens)

Sample Source

placenta

Disease

Pre-eclampsia

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	!Sample Title	Group	Placenta tissue
GSM225470	Placenta tissue from patient with normal labor, replicate 1 of 26	normal	TRUE
GSM225471	Placenta tissue from patient with normal labor, replicate 2 of 26	normal	TRUE
GSM225472	Placenta tissue from patient with normal labor, replicate 3 of 26	normal	TRUE
GSM225473	Placenta tissue from patient with normal labor, replicate 4 of 26	normal	TRUE
GSM225474	Placenta tissue from patient with normal labor, replicate 5 of 26	normal	TRUE

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File
sampleset4000017_sampleannotations_group.csv Sample Set Spreadsheet
sampleset4000017_sampleannotations_group.csv Sample Set Spreadsheet

Samples Viewer / Editor

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Sample ID	!Sample Title	Group	Placenta tissue
GSM225470	Placenta tissue from patient with normal labor, replicate 1 of 26	normal	TRUE
GSM225471	Placenta tissue from patient with normal labor, replicate 2 of 26	normal	TRUE
GSM225472	Placenta tissue from patient with normal labor, replicate 3 of 26	normal	TRUE
GSM225473	Placenta tissue from patient with normal labor, replicate 4 of 26	normal	TRUE
GSM225474	Placenta tissue from patient with normal labor, replicate 5 of 26	normal	TRUE
GSM225475	Placenta tissue from patient with normal labor, replicate 6 of 26	normal	TRUE
GSM225476	Placenta tissue from patient with normal labor, replicate 7 of 26	normal	TRUE
GSM225477	Placenta tissue from patient with normal labor, replicate 8 of 26	normal	TRUE
GSM225478	Placenta tissue from patient with normal labor, replicate 9 of 26	normal	TRUE
GSM225479	Placenta tissue from patient with normal labor, replicate 10 of 26	normal	TRUE
GSM225480	Placenta tissue from patient with normal labor, replicate 11 of 26	normal	TRUE
GSM225481	Placenta tissue from patients with severe preeclampsia, replicate 1 of 17	preeclampsia	TRUE
GSM225483	Placenta tissue from patient with normal labor, replicate 12 of 26	normal	TRUE
GSM225484	Placenta tissue from patient with normal labor, replicate 13 of 26	normal	TRUE
GSM225485	Placenta tissue from patient with normal labor, replicate 14 of 26	normal	TRUE
GSM225486	Placenta tissue from patient with normal labor, replicate 15 of 26	normal	TRUE
GSM225487	Placenta tissue from patient with normal labor, replicate 16 of 26	normal	TRUE
GSM225488	Placenta tissue from patient with normal labor, replicate 17 of 26	normal	TRUE
GSM225489	Placenta tissue from patient with normal labor, replicate 18 of 26	normal	TRUE
GSM225490	Placenta tissue from patient with normal labor, replicate 19 of 26	normal	TRUE
GSM225491	Placenta tissue from patient with normal labor, replicate 20 of 26	normal	TRUE
GSM225492	Placenta tissue from patient with normal labor, replicate 21 of 26	normal	TRUE
GSM225493	Placenta tissue from patient with normal labor, replicate 22 of 26	normal	TRUE
GSM225494	Placenta tissue from patient with normal labor, replicate 23 of 26	normal	TRUE
GSM225495	Placenta tissue from patient with normal labor, replicate 24 of 26	normal	TRUE
GSM225496	Placenta tissue from patient with normal labor, replicate 25 of 26	normal	TRUE
GSM225497	Placenta tissue from patient with normal labor, replicate 26 of 26	normal	TRUE
GSM225498	Placenta tissue from patients with severe preeclampsia, replicate 2 of 17	preeclampsia	TRUE
GSM225499	Placenta tissue from patients with severe preeclampsia, replicate 3 of 17	preeclampsia	TRUE
GSM225500	Placenta tissue from patients with severe preeclampsia, replicate 4 of 17	preeclampsia	TRUE
GSM225501	Placenta tissue from patients with severe preeclampsia, replicate 5 of 17	preeclampsia	TRUE
GSM225502	Placenta tissue from patients with severe preeclampsia, replicate 6 of 17	preeclampsia	TRUE
GSM225503	Placenta tissue from patients with severe preeclampsia, replicate 7 of 17	preeclampsia	TRUE
GSM225504	Placenta tissue from patients with severe preeclampsia, replicate 8 of 17	preeclampsia	TRUE
GSM225505	Placenta tissue from patients with severe preeclampsia, replicate 9 of 17	preeclampsia	TRUE
GSM225506	Placenta tissue from patients with severe preeclampsia, replicate 10 of 17	preeclampsia	TRUE
GSM225507	Placenta tissue from patients with severe preeclampsia, replicate 11 of 17	preeclampsia	TRUE
GSM225508	Placenta tissue from patients with severe preeclampsia, replicate 12 of 17	preeclampsia	TRUE
GSM225509	Placenta tissue from patients with severe preeclampsia, replicate 13 of 17	preeclampsia	TRUE
GSM225510	Placenta tissue from patients with severe preeclampsia, replicate 14 of 17	preeclampsia	TRUE
GSM225511	Placenta tissue from patients with severe preeclampsia, replicate 15 of 17	preeclampsia	TRUE
GSM225512	Placenta tissue from patients with severe preeclampsia, replicate 16 of 17	preeclampsia	TRUE
GSM225513	Placenta tissue from patients with severe preeclampsia, replicate 17 of 17	preeclampsia	TRUE

Group Sets View in Gene Expression Browser

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