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Clinical

Altered Gene Expression Profile of Microvascular Endothelium in Placentas from IUGR/Preeclamptic Pregnancies - GSE25861

Purpose

The placental microvasculature of the human fetus is essential for the efficient transfer of gases, nutrients and waste between the mother and fetus. Microvascular hypoplasia of the terminal villi is associated with the placental pathology observed in cases of severe Intra Uterine Growth Restriction (IUGR). We used novel methods to isolate a pure population of placental microvascular endothelial cells from control preterm placentas (n=3) and placenta complicated by severe IUGR (n=6) with superimposed preeclampsia (n=5). Distal placental villous tissue was collected to enrich for terminal villi. Tissue was minced, digested and placental microvascular endothelial cells (PlMEC) were positively selected using tocosylated magnetic Dynabeads labeled with Human Endothelial Antigen lectin. The purity of the PlMEC (95%) was assessed by CD31 immunocytochemistry. RNA was extracted from the PlMEC samples and also from 3 term placenta and subjected to Affymetrix microarray analysis (U133Plus2 array chips). Data from the 3 term placentas and 3 preterm PlMEC arrays was used to generate an endothelial cell specific gene profile. This profile was used to identify the endothelial genes differentially regulated in all 6 IUGR cases. BTNL9 and NTRK2 transcripts were upregulated and SAA1, GNAS and SLAMF1 transcripts were downregulated as relative to the preterm controls. These changes were validated by Real time PCR in the PlMEC samples. This novel study is the first to identify endothelial candidate genes that may play a role in the villous hypoplasia of severe IUGR. This work advances our understanding of the molecular defects in placental microvascular endothelial cells in normal and pathologic pregnancies.

Hypothesis

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Experimental Design

Three normal control placentas were compared against endothelial cells isolated from IUGR, IUGR and preeclampsia and normal pregancies. In this way enrichment of endothelial genes could be determined as well as changes in the expression pattern of endothelial genes due to different pathologies.

Experimental Variables

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Controls

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Methods

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Additional Information

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Microarray
Affymetrix HG-U133_Plus_2
10 Samples Loaded: 10
Human (Homo sapiens)
placenta
IUGR, pre-eclampsia
Sample Set Spreadsheet
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Samples Preview
Sample ID parity other pathology gender apgars
GSM634971 0 Laminar necrosis of decidua capsilaris, foci of intravillous hemorrhage PTL Male 5/7/-
GSM634972 1 Laminar necrosis of decidua parietalis IUGR Male 9/9/-
GSM634973 0 Circummarginate insertion of membranes, velamentous insertion of the umbilical cord IUGR Male 8/9/-
GSM634974 0 Multifocal infarction IUGR Female 7/9/-
GSM634975 1 Multifocal infarction, chronic deciduitis IUGR Male 7/10/2010
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File
sampleset4000009_sampleannotations_group.csv
Sample Set Spreadsheet
sampleset4000009_sampleannotations_group.csv
Sample Set Spreadsheet
Raw Signal
Raw Signal
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Sample ID Parity Other Pathology Gender Apgars Gravidity Smoker !Sample Title Group Advanced villous maturity Afi (cm) (closest to delivery) Alt (u/l) (range) Birthweight (g) Birthweight percentile Bpp (closest to delivery) C-section (y/n) Chronic htn (diagnosed <20 weeks or pre-pregnancy) Collection date Creatinine (um) (range) Decidual vasculopathy Distal villous hypoplasia Excess perivillous fibrin desposition Fetal thrombotic vasculopathy Gestational age at delivery Indication for delivery Maternal age (yrs) Max dbp Max sbp New or superimposed preeclampsia Nst (closest to delivery) Other dopplers (closest to delivery) Other medical issues Path placental weight percentile Placental weight (g) fresh (before biopsies) Placental weight (g) in path Pre-pregnancy bmi Proteinuria (max values) Thrombocytes (x10^9/l) (range) Umbilical art dopper (closest to delivery)
GSM634971
0
Laminar necrosis of decidua capsilaris, foci of intravillous hemorrhage
PTL
Male
5/7/-
1
No
Preterm labour control endothelial cells_S01
control endothelial cells
 
No data
No data
1040
>90 and <=95
No data
No
No
Oct 27 2006
No data
 
 
 
 
25+6
Sontaneous Preterm Labour: Yes
25
80
124
No
No data
No data
Random glucose measurement on Oct 20 2006 was 16.5 mM
10 to 25th
No data
180
26.1
No data
165
No data
GSM634972
1
Laminar necrosis of decidua parietalis
IUGR
Male
9/9/-
2
No
IUGR endothelial cells_S02
IUGR endothelial cells
 
Normal (@ 28w)
20
1304
<3rd
8-Jun
Yes
No
Oct 26 2006
50
 
Yes
Yes (5% of parenchyma)
 
34+3
Non-reasuring fetal testing: Yes
38
90
152
New
(NRFHR)*
Bilateral abnormal uterine artery Dopplers, and fetal cerebral redistribtion noted (abnormal MCA)
 
<10th
No data
183.5
26.5
+1, 0.45g/d
181-228
REDF
GSM634973
0
Circummarginate insertion of membranes, velamentous insertion of the umbilical cord
IUGR
Male
8/9/-
1
No
IUGR endothelial cells_S03
IUGR endothelial cells
 
11
14-25
820
3rd to 5th
8-Aug
Yes
No
Oct 27 2006
46-56
 
Yes
 
Yes
29+3
Non-reasuring fetal testing: Yes
24
119
180
New
(NRFHR)*
Normal uterine artery and ductus venosus Dopplers. MCA PI range 1.1-1.8
 
<10th
200
167.5
27.82
2+, 0.25g/d
242-267
REDF (intermittent)
GSM634974
0
Multifocal infarction
IUGR
Female
7/9/-
1
No
IUGR endothelial cells_S04
IUGR endothelial cells
 
11 to 14
58-73
1160
5th to 10th
8-Jun
Yes
Yes
Oct 31 2006
68-74
 
Yes
 
 
31+0
Non-reasuring fetal testing: Yes
30
104
170
No proteinuria
NRFHR
Deep A wave (ductus venosus), redistributed MCA
Hearing impaired, and polydipsia
<10th
(180*)
98.5
23.4
Trace only
156-170
REDF (intermittent)
GSM634975
1
Multifocal infarction, chronic deciduitis
IUGR
Male
7/10/2010
2
No
IUGR endothelial cells_S05
IUGR endothelial cells
Yes
10
18-Dec
730
<3rd
8-Jun
Yes
Yes
Nov 7 2006
51-60
Yes
 
 
Yes (focal)
29+0
Non-reasuring fetal testing: Yes
32
120
190
Superimposed
Non-reactive results on Nov 2,3 2006
Bilateral abnormal uterine artery Dopplers, and fetal cerebral redistribution noted (abnormal MCA). Normal DV.
Increased cholesterol
<10th
(290*)
146
25.6
1.46g/d
213-260
AEDF
GSM634976
1
Laminar necrosis of decidua parietalis
IUGR
Male
8/9/-
2
No
IUGR endothelial cells_S06
IUGR endothelial cells
Yes
9
14-96
750
5th to 10th
8-Aug
Yes
Yes
Nov 13 2006
42-54
Yes
 
 
 
27+5
Non-reasuring fetal testing: Yes
38
110
180
Superimposed
(NRFHR)*
Deep A wave (ductus venosus) and cerebral redistribution noted
Elevated triglycerides, hyperprolactinemia and GBS bacteriuria
<10th
170
87
25
+3, 0.28g/d
71-201
AEDV (and intermittent REDV on one side)
GSM634977
0
Overcoiled cord, focal villous hypoplasia
PTL
Male
3/6/-
2
No
Preterm labour control endothelial cells_S07
control endothelial cells
 
25
No data
1520
50th to 90th
8-Aug
No
No
Nov 21 2006
47
 
Yes
 
 
30+0
Sontaneous Preterm Labour: Yes
31
70
133
No
No data
No data
Endometriosus (stage I, diagnosed at 21 years of age)
<10th
(350*)
194
20.2
No data
326-327
No data
GSM634978
1
 
IUGR
Male
3/7/-
2
No
IUGR endothelial cells_S08
IUGR endothelial cells
 
6
15-Aug
740
10th to 50th
8-Aug
Yes
Yes
Nov 22 2006
46-62
Yes
Yes
 
 
26+5
Non-reasuring fetal testing: Yes
27
130
190
Superimposed
NRFHR (repeated decels noted)
MCA PI 1.44-1.69, MCA PSV 55.3-62.6, fetal redistribution noted
 
10th to 25th
220
184
31.1
+2, 0.31g/d
207-278
REDF
GSM634979
2
Wt < 10th, undercoiled cord, partial circumarginate insertion of membranes
PTL
Male
8/8/-
6
Yes; chronic smoker throughout pregnancy (>1/2 pack/day) and marijuana use (1-5x/day) through first trimester
Preterm labour control endothelial cells_S09
control endothelial cells
 
Normal (@ 31w)
11-Oct
2040
10th to 50th
No data
No
No
Dec 10 2006
37-38
 
Yes (foci)
 
 
33+1
IOL for other fetal indications: Yes
23
89
134
No
FHR stable (Dec 11'06)
No data
GDM on insulin, smoking, fetal anomalies (cardiac and renal)
<10th
(520*)
278
29.6
1
315-349
No data
GSM634980
 
 
PTL
 
 
 
 
Preterm labour control villous tree_JK1
control villous tree cells
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

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